Find a Research Expert

Experts
 Menu

Karsten Hokamp

Institution

Trinity College Dublin

Contact

Subjects

Biochemistry

Microbiology

Details
Publications 47
As first author 7
As last author 7
Unique topics 366
Collaborations 94
Sources 12
Are you Karsten Hokamp? Click here to provide feedback on your profile.
All
2018
2017
2016
2015
2014
2013
2012
2011
2010
Earlier
All
2018
2017
2016
2015
2014
2013
2012
2011
2010
Earlier

2018

Role of a single noncoding nucleotide in the evolution of an epidemic African clade of
2017

A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities.
2017

A dual-strategy expression screen for candidate connectivity labels in the developing thalamus
2017

CD10
2017

CD10 − /ALDH − Cells are the Sole Cisplatin-Resistant Component of a Novel Ovarian Cancer Stem Cell Hierarchy
2017

Dysregulated mitogen-activated protein kinase signalling as an oncogenic basis for clear cell sarcoma of the kidney.
2017

The
2017

The 2017 Bioinformatics Open Source Conference (BOSC).
2016

A dual-strategy expression screen for candidate connectivity labels in the developing thalamus.
2016

Distinct histone methylation and transcription profiles are established during the development of cellular quiescence in yeast.
2016

Fam60a defines a variant Sin3a-Hdac complex in embryonic stem cells required for self-renewal.
2016

The 2015 Bioinformatics Open Source Conference (BOSC 2015).
2016

microRNA regulatory circuits in a mouse model of inherited retinal degeneration.
2015

Circadian control of innate immunity in macrophages by miR-155 targeting Bmal1
2015

Delineating transcriptional networks of prognostic gene signatures refines treatment recommendations for lymph node-negative breast cancer patients.
2015

Genome-Wide Analysis of Phosphorylated PhoP Binding to Chromosomal DNA Reveals Several Novel Features of the PhoPR-Mediated Phosphate Limitation Response in Bacillus subtilis.
2015

Perl One-Liners: Bridging the Gap Between Large Data Sets and Analysis Tools.
2015

Re-engineering cellular physiology by rewiring high-level global regulatory genes.
2014

A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni.
2014

A transcription factor network coordinates attraction, repulsion, and adhesion combinatorially to control motor axon pathway selection.
2014

Analysis of the Bovine Monocyte-Derived Macrophage Response to Mycobacterium avium Subspecies Paratuberculosis Infection Using RNA-seq.
2014

Complete Genome Sequence of Salmonella enterica Serovar Agona Pulsed-Field Type SAGOXB.0066, Cause of a 2008 Pan-European Outbreak.
2014

Gene expression changes during retinal development and rod specification.
2014

Key Hub and Bottleneck Genes Differentiate the Macrophage Response to Virulent and Attenuated Mycobacterium bovis.
2014

RNA-seq Transcriptional Profiling of Peripheral Blood Leukocytes from Cattle Infected with Mycobacterium bovis.
2014

Telomeric ORFs (TLOs) in Candida spp. encode Mediator subunits that regulate distinct virulence traits
2013

A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni.
2013

An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium.
2013

CHD5 is required for neurogenesis and has a dual role in facilitating gene expression and polycomb gene repression.
2013

Receptor-mediated recognition of mycobacterial pathogens.
2013

Whole-transcriptome, high-throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro
2012

Global Gene Expression and Systems Biology Analysis of Bovine Monocyte-Derived Macrophages in Response to In Vitro Challenge with Mycobacterium bovis
2012

LeuO is a global regulator of gene expression in Salmonella enterica serovar Typhimurium.
2012

The WalRK (YycFG) and σ(I) RsgI regulators cooperate to control CwlO and LytE expression in exponentially growing and stressed Bacillus subtilis cells.
2012

The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
2011

Cell envelope gene expression in phosphate-limited Bacillus subtilis cells.
2011

Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes
2011

Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis.
2011

Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis.
2010

Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism.
2009

Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS.
2009

The complex relationship of gene duplication and essentiality.
2008

A common microRNA signature in mouse models of retinal degeneration.
2007

Altered retinal microRNA expression profile in a mouse model of retinitis pigmentosa.
2007

The extracellular leucine-rich repeat superfamily; a comparative survey and analysis of evolutionary relationships and expression patterns.
2004

PubCrawler: keeping up comfortably with PubMed and GenBank
2002

A bioinformatics approach to (intra-) genome comparisons

These arethe12 unique sources for Karsten Hokamp's 47 publications. A single publication may appear in multiple sources. Click on a name or publication count to see the publications for a particular source.

Source #
Ireland -> Dublin Institute of Technology 1
Ireland -> Dublin Institute of Technology -> PubMed 1
Ireland -> Maynooth University 1
Ireland -> Royal College of Surgeons in Ireland 2
Ireland -> Royal College of Surgeons in Ireland -> PubMed 2
Ireland -> TU Dublin 1
Ireland -> Teagasc 3
Ireland -> Teagasc -> PubMed 1
Ireland -> Trinity College Dublin 36
Ireland -> Trinity College Dublin -> PubMed 18
Ireland -> University College Dublin 6
Ireland -> University College Dublin -> PubMed 6

  1. Further insights

    Clicking through these tabs will give you a wealth of further insights into this expert through their commonly used topics, the evolution of their expertise, their collaborators and their publications.

  2. Details

    Here is a quick breakdown of this expert's publication history

  3. Contact

    If this is the expert you have been looking for, simply click here to make contact.