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Matthew S. McCabe

Institution

Teagasc

Contact

Subjects

Veterinary

Microbiology

Details
Publications 45
As first author 6
As last author 4
Unique topics 306
Collaborations 68
Sources 9
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2020
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2012
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Earlier

2020

Links between the rumen microbiota, methane emissions and feed efficiency of finishing steers offered dietary lipid and nitrate supplementation
2019

Complete Genome Sequence of Mannheimia varigena Isolated from Bovine Milk
2019

Concurrent and long-term associations between the endometrial microbiota and endometrial transcriptome in postpartum dairy cows
2019

Exploring the roles of and interactions among microbes in dry co-digestion of food waste and pig manure using high-throughput 16S rRNA gene amplicon sequencing
2019

Long-term effects of prior diets, dietary transition and pregnancy on adipose gene expression in dairy heifers
2018

Evaluating Established Methods for Rumen 16S rRNA Amplicon Sequencing With Mock Microbial Populations
2018

Evaluation of Microbial Communities Associated With the Liquid and Solid Phases of the Rumen of Cattle Offered a Diet of Perennial Ryegrass or White Clover
2018

RNA-seq analysis of bovine adipose tissue in heifers fed diets differing in energy and protein content
2017

A dual targeted β-defensin and exome sequencing approach to identify, validate and functionally characterise genes associated with bull fertility
2017

Anaerobic co-digestion of pig manure and food waste; effects on digestate biosafety, dewaterability, and microbial community dynamics.
2017

Illumina MiSeq 16S amplicon sequence analysis of bovine respiratory disease associated bacteria in lung and mediastinal lymph node tissue
2017

Leukocyte profile, gene expression, acute phase response, and metabolite status of cows with sole hemorrhages.
2017

Plane of nutrition affects the phylogenetic diversity and relative abundance of transcriptionally active methanogens in the bovine rumen.
2017

The Structural and Functional Capacity of Ruminal and Cecal Microbiota in Growing Cattle Was Unaffected by Dietary Supplementation of Linseed Oil and Nitrate
2017

The transcriptome of the endometrium and placenta is associated with pregnancy development but not lactation status in dairy cows.
2016

Characterisation of the Whole Blood mRNA Transcriptome in Holstein-Friesian and Jersey Calves in Response to Gradual Weaning.
2016

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome.
2016

Effect of Dietary Restriction and Subsequent Re-Alimentation on the Transcriptional Profile of Bovine Skeletal Muscle
2016

Illumina MiSeq 16S amplicon sequence analysis of bovine respiratory disease associated bacteria in lung and mediastinal lymph node tissue.
2015

An ultra-high density genetic linkage map of perennial ryegrass (Lolium perenne) using genotyping by sequencing (GBS) based on a reference shotgun genome assembly.
2015

Characterisation of haematological profiles and whole blood relative gene expression levels in Holstein-Friesian and Jersey bull calves undergoing gradual weaning.
2015

Fertility and genomics: comparison of gene expression in contrasting reproductive tissues of female cattle.
2015

Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle
2015

Transcriptional profiling of the ovine abomasal lymph node reveals a role for timing of the immune response in gastrointestinal nematode resistance.
2014

Differences in leukocyte profile, gene expression, and metabolite status of dairy cows with or without sole ulcers
2014

Effect of Dietary Restriction and Subsequent Re-Alimentation on the Transcriptional Profile of Bovine Skeletal Muscle.
2014

Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle.
2014

MicroRNA profiling of the bovine alveolar macrophage response to Mycobacterium bovis infection suggests pathogen survival is enhanced by microRNA regulation of endocytosis and lysosome trafficking
2013

Next Generation Sequencing Reveals the Expression of a Unique miRNA Profile in Response to a Gram-Positive Bacterial Infection
2013

Profiling microRNA expression in bovine alveolar macrophages using RNA-seq.
2012

Effect of phenotypic residual feed intake and dietary forage content on the rumen microbial community of beef cattle.
2012

Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection.
2012

Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples.
2012

RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance
2012

Transcriptomic analysis of the stress response to weaning at housing in bovine leukocytes using RNA-seq technology
2011

Immunogenicity of chloroplast-derived HIV-1 p24 and a p24-Nef fusion protein following subcutaneous and oral administration in mice
2011

RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance.
2010

Associations between newly discovered polymorphisms in the Bos taurus growth hormone receptor gene and performance traits in Holstein-Friesian dairy cattle.
2010

Associations between the K232A polymorphism in the diacylglycerol-O-transferase 1 (DGAT1) gene and performance in Irish Holstein-Friesian dairy cattle
2009

Plant-based strategies aimed at expressing HIV antigens and neutralizing antibodies at high levels. Nef as a case study
2008

Comparative evaluation of viral, nonviral and physical methods of gene delivery to normal and transformed lung epithelial cells
2008

Plastid transformation of high-biomass tobacco variety Maryland Mammoth for production of human immunodeficiency virus type 1 (HIV-1) p24 antigen.
2007

Active immunization of hamsters against Clostridium difficile infection using surface-layer protein.
2005

Passive immunisation of hamsters against Clostridium difficile infection using antibodies to surface layer proteins.
2005

Stable plastid transformation in lettuce (Lactuca sativa L.)

These arethe9 unique sources for Matthew S. McCabe's 45 publications. A single publication may appear in multiple sources. Click on a name or publication count to see the publications for a particular source.

Source #
Ireland -> Dublin City University 1
Ireland -> Dublin City University -> PubMed 1
Ireland -> Maynooth University 6
Ireland -> Maynooth University -> PubMed 1
Ireland -> Teagasc 37
Ireland -> Teagasc -> PubMed 17
Ireland -> Trinity College Dublin 4
Ireland -> Trinity College Dublin -> PubMed 2
Ireland -> University of Limerick 1

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