Type

Journal Article

Authors

Alex Cheong
Till D. Frank
Cormac T. Taylor
Susan F. Fitzpatrick
Ulrike Bruning
Marc Birtwistle

Subjects

Biochemistry

Topics
cell line models biological hypoxia inducible factor hif hypoxia inducible factor copepoda nfkb cross talk humans genes reporter luciferases immunology enzymology genetics hypoxia inducible factor 1 transcription factor nf b cell line tumor molecular sequence data inflammation anoxia mathematical modelling transcription genetic transcription cyclooxygenase 2 promoter regions genetic hypoxia nf kappa b base sequence animals

NFκB and HIF display synergistic behaviour during hypoxic inflammation (2011)

Abstract The oxygen-sensitive transcription factor hypoxia inducible factor (HIF) is a key regulator of gene expression during adaptation to hypoxia. Crucially, inflamed tissue often displays regions of prominent hypoxia. Recent studies have shown HIF signalling is intricately linked to that of the pro-inflammatory transcription factor nuclear factor kappa B (NFκB) during hypoxic inflammation. We describe the relative temporal contributions of each to hypoxia-induced inflammatory gene expression and investigate the level of crosstalk between the two pathways using a novel Gaussia princeps luciferase (Gluc) reporter system. Under the control of an active promoter, Gluc is expressed and secreted into the cell culture media, where it can be sampled and measured over time. Thus, Gluc constructs under the control of either HIF or NFκB were used to resolve their temporal transcriptional dynamics in response to hypoxia and to cytokine stimuli, respectively. We also investigated the interactions between HIF and NFκB activities using a construct containing the sequence from the promoter of the inflammatory gene cyclooxygenase 2 (COX-2), which includes functionally active binding sites for both HIF and NFκB. Finally, based on our experimental data, we constructed a mathematical model of the binding affinities of HIF and NFκB to their respective response elements to analyse transcriptional crosstalk. Taken together, these data reveal distinct temporal HIF and NFκB transcriptional activities in response to hypoxic inflammation. Furthermore, we demonstrate synergistic activity between these two transcription factors on the regulation of the COX-2 promoter, implicating a co-ordinated role for both HIF and NFκB in the expression of COX-2 in hypoxic inflammation.
Collections Ireland -> University College Dublin -> Systems Biology Ireland
Ireland -> University College Dublin -> Institutes and Centres
Ireland -> University College Dublin -> SBI Research Collection

Full list of authors on original publication

Alex Cheong, Till D. Frank, Cormac T. Taylor, Susan F. Fitzpatrick, Ulrike Bruning, Marc Birtwistle

Experts in our system

1
Alex Cheong
University College Dublin
Total Publications: 18
 
2
Till D. Frank
University College Dublin
Total Publications: 12
 
3
Cormac T. Taylor
University College Dublin
Total Publications: 110
 
4
Susan F. Fitzpatrick
University College Dublin
Total Publications: 9
 
5
Ulrike Bruning
University College Dublin
Total Publications: 10